Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVL---PGYGWFIAARIIMAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLG--RMIAVALGWKSVFGAIALLGLIAMVVIFFTLPYTEGD-------KPV--P----------------------LLQQLALFKKRKVAMGLSITFFWLGG-----YSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLS-L-V-T--H--SYIGVLVILILWSFAAW-STGPTQQFHLATIEP-EMSGVLLSMNQSMMQFAMAVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ |
4YB9 Chain:D ((69-462)) | ---------------------------------------LLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSELAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFL-PFFPESPRYLLIQKKDEAAAKSALRRLAEIEEILEEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYL-SAGVNEDDVQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGALALQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVHWLSNFTVGLVFPFIQVGLGA-YSFVIFAVICLLTTVYIFLIIPE----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -356900 for 2691 contacts (-132.6/contact) +
2D Compatibility (PS) -34190 + (NN) -2724 + (LL) 4532
1D Compatibility (HY) -24000 + (ID) 2150
Total energy: -415432.0 ( -154.38 by residue)
QMean score : 0.265
|
|
|