Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVL---PGYGWFIAARIIMAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLG--RMIAVALGWKSVFGAIALLGLIAMVVIFFTLPYTEGD-------KPV--P----------------------LLQQLALFKKRKVAMGLSITFFWLGG-----YSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLS-L-V-T--H--SYIGVLVILILWSFAAW-STGPTQQFHLATIEP-EMSGVLLSMNQSMMQFAMAVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ
4YB9 Chain:D ((69-462))---------------------------------------LLWSVTVSMFPFGGFLGSLMVGPLVNNLGRKGTLLFNNIFSIVPALLMGFSELAKSFEMIIVARVLVGICAGLSSNVVPMYLGELAPKNWRGALGVVPQLFITIGILVAQIFGLRSLLANEEGWPILLGLTGIPAVLQLLFL-PFFPESPRYLLIQKKDEAAAKSALRRLAEIEEILEEDRAEKAVGFISVLKLFKMRSLRWQVISIIVLMAGQQLSGVNAIYYYADQIYL-SAGVNEDDVQYVTAGTGAVNVLITVCAIFVVELMGRRFLLLLGFSVCFTACCVLTGALALQDVISWMPYVSIACVISYVIGHALGPSPIPALLVTEIFLQSSRPAAYMVAGTVHWLSNFTVGLVFPFIQVGLGA-YSFVIFAVICLLTTVYIFLIIPE-----------


General information:
TITO was launched using:
RESULT:

Template: 4YB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -356900 for 2691 contacts (-132.6/contact) +
2D Compatibility (PS) -34190 + (NN) -2724 + (LL) 4532
1D Compatibility (HY) -24000 + (ID) 2150
Total energy: -415432.0 ( -154.38 by residue)
QMean score : 0.265

(partial model without unconserved sides chains):
PDB file : Tito_4YB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YB9-query.scw
PDB file : Tito_Scwrl_4YB9.pdb: