Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKELIKEHQKDINPA----LQLHDWVEYYRPFAANGQSANYIPALGKVNDSQLGICVLEPDGTMIHAGDWNVSFTMQSISKVISFIAACMSRGIPYVLDRVDVEPTGDAFNSIIRLEINKPGKPFNPMINAGALTIASILPG-ESAYEKLEFLYSVMETLIGKR-PRIHEEVFRSEWETAHRNRALAYYLKETNFL---EAEVEETLEVYLKQCAMESTTEDIALIGLILAHDGYHPIRHEQVIPKDVAKLAKALMLTCGMYNASGKYAAFVGVPAKSGVSGGIMALVPPSARREQPFQSGCGIGIYGPAIDEYGNSLTGGMLLKHMAQEWELSIF
3UO9 Chain:A ((147-472))-------RKFVIPDFMSFTSHIDELYESA-KKQSGGKVADYIPQLAKFSPDLWGVSVCTVDGQRHSTGDTKVPFCLQSCVKPLKYAIAVNDLGTEYVHRYVGKEPSGLRFNKLF--LN-EDDKPHNPMVNAGAIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERESGDRNFAIGYYLKEKKCFPEGTD-MVGILDFYFQLCSIEVTCESASVMAATLANGGFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVAGGILLVVPN----------VMGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNY


General information:
TITO was launched using:
RESULT:

Template: 3UO9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1867 -231666 -124.08 -759.56
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -124.08
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3UO9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UO9-query.scw
PDB file : Tito_Scwrl_3UO9.pdb: