Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSHSVVCIGELLIDFFCTDVDVDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKDPFGYFLKRTLDAVHVDTSMLVMD-EKAPTTLAFVSLKQNGERDFVFNRG--ADALFTLEDIDQEKLNEAKILHFGSATALLSDPFCSAYLRLMSIAKDNGQFISFDPNYREDLWRGRVSEFVSVAKKAIAVSDFVKVSDEELEIISGVKD---HEKGVAILHEIGANIVAVTLGKSGTLLSNG-KDREIIPSIPVTSIDSTGAGDAFVGAALYQLANTDQIQSVDADFVKLREIVAFANKVGALVCTKIGAIDALPSLDEIGVSL
2QCV Chain:A ((10-323))-REFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTAL-SKSPSREAVLKAIRLAKRNDVKVVFELDYRPYSWETPE-ETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIKHGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGK----------GIETALKYGSASASIVVSK-----AMPSVEEIEALI


General information:
TITO was launched using:
RESULT:

Template: 2QCV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1875 -179448 -95.71 -594.20
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -95.71
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_2QCV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QCV-query.scw
PDB file : Tito_Scwrl_2QCV.pdb: