Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILQLDNVSLKRNG----KWILKDIHWKVEEKENWVLYGLNGAGKTALLNMLCSYYFPTSGEMQVLGHEFGKTELGE--KLRRKIGLVSAA---LQQKLYPADSAFEIALSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQRALIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYVTHHAEEILPVFDKALLLKQGEVFGSGEIKEMLTD---QILSAFFDTPIHVLWNQDRPFLTRAEPITNA--------------------------------------------------------------------------
3TUZ Chain:H ((23-362))HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDN---------TPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGL-TILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV


General information:
TITO was launched using:
RESULT:

Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1221 -175583 -143.80 -691.27
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain H : 0.68

3D Compatibility (PKB) : -143.80
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3TUZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TUZ-query.scw
PDB file : Tito_Scwrl_3TUZ.pdb: