Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLCREVWIEVNLDAVKKNLRAIRRHIPHKSKIMAVVKANGYGHGSIEVARHALEHGASELAVASVEEGIVLRKAGITAPILVLGFTSLSCVKKSAAWNITLSAFQVDWMKEANEILE-KEASANRLAIHINVDTGMGRLGVRTKEE-LLEVVKALKASKFLRWTGIFTHFSTADEPDTTLTKLQHEKFISFLSFLKKQGIELPTVHMCNTAAAIAFPEFSADMIRLGIGLYGLYPSAYIKQLNLVKL-EPALSLKARIAYVKTMRTEPRTVSYGATYIAEPNEVIATLPIGYADGYSRALSNRGFVLHRGKRVPVAGRVTMDMIMVSLGENGEGKQGDEVVIYGKQKGAEISVDEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPVLYV
4A3Q Chain:A ((4-378))--KYYRSAYMNVDLNAVASNFKVFSTLHP-NKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQE--KKLWLHIKLDTGMGRLGIKD-TNTYQEVIEIIQQYEQLVFEGVFTHF--------DMTTEQYQRFKDMVN----EAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKV-KVHLKPSVQLIANVVQTKT-------------------TTIALLPIGYADGYLRIMQ-GSFVNVNGHQCEVIGRVCMDQTIVKVPD--QVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNLSRRLPRIYHDGDQRFVTN------


General information:
TITO was launched using:
RESULT:

Template: 4A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1979 -100437 -50.75 -289.44
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -50.75
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_4A3Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4A3Q-query.scw
PDB file : Tito_Scwrl_4A3Q.pdb: