Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAQLFNLESRLDELENEINTQYCELDTNLDALKSNRIELESQLEKFESSLTNRLQGSISNNCRNDLLNLGYTHSQVDCMSDEEVYAALDKIDEEIHNTDQDY-STGF---EDLEKQIIEMKRDYFIDRKERGSGNFDEAWEGEILDLEFEYTVLCLEKGLEPLNYIITWEG
4D41 Chain:G ((90-141))---------------------------------------------------------------------------QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFL---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 49 -1775 -36.22 -36.98
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain G : 0.64

3D Compatibility (PKB) : -36.22
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_4D41.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D41-query.scw
PDB file : Tito_Scwrl_4D41.pdb: