Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFGLKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVATMTITEERKKEVDFSDVYFEAGQSLLVKKGSKIKSVENLGKGSKVLAVKGSTSSQNIREKAPEASVLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN--------YQLTGKPFT-DEPYGIAVKKGQSALAKEINASLKKMKSDGRYDEIYKKWIKEDPAE
3KZG Chain:A ((19-245))---------------------------------------------LNLTIGTSKFNPPFEVWSGNNSSLYGFDIDLMQEICRRL---HATCTFEAYIFDDLFPALKNREVDLVIASMIITDERKKHFIFSLPYMESNSQYITTVDSKISTFDDL-HGKKIGVRKGTPYARQVLSENRNNQVIFYELIQDMLLGLSNNQVDASLMDYEAAKYWMASEPYAYKLIGKKYKLIGKKISIGEGYSIMANPDQFVLIKKINKILLEMEADGTYLRLYSEYF------


General information:
TITO was launched using:
RESULT:

Template: 3KZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1127 -47179 -41.86 -216.42
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -41.86
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.507

(partial model without unconserved sides chains):
PDB file : Tito_3KZG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KZG-query.scw
PDB file : Tito_Scwrl_3KZG.pdb: