Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVAIASDHGGVHIRNEIKELMDELQIEYIDMGCDCGSGSVDYPDYAFPVAEKVVSGEVDRGILICGTGIGMSISANKVKGIRCALAHDTFSAKATREHNDTNILAMGERVIGPGLAREIAKIWLTTEFTGGRHQTRIGKISDYEEKNL
4LFM Chain:B ((1-128))MIIAIGNDHIVTMQKIEISNMLKDMGYTVIDEGT-YDTHRTHYPIYGKKVAEDVADGRADLGIVMCGTGIGISTAADKNEGIRAAMCDDVTSAVYAREQLNANVLGIGGAVVGVHLIQDIVKAYLDATY--------------------


General information:
TITO was launched using:
RESULT:

Template: 4LFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 743 -96525 -129.91 -754.10
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -129.91
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4LFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LFM-query.scw
PDB file : Tito_Scwrl_4LFM.pdb: