Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHESRLASARLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN
1XI3 Chain:A ((13-212))
------NKLKLYVITDRRLKP--EVESVREALEGGATAIQMRIKNAPTR---------EMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPIEVAKEI-APNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT----DARVIGLEGLRKIVE--SVKIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE--
General information:
TITO was launched using:
RESULT:
Template:
1XI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136968 for 1716 contacts (-79.8/contact) +
2D Compatibility (PS) -22293 + (NN) -20037 + (LL) 1072
1D Compatibility (HY) -10400 + (ID) 3500
Total energy: -192126.0 ( -111.96 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_1XI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI3-query.scw
PDB file :
Tito_Scwrl_1XI3.pdb
: