Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGVSEAERRGHRKLVRFQARRAIGPIRPTSAAWDRDFDPAGKRIAVVGTDAAAAHYISRLSESAAS-------VTVFTQ---APRRVVTGVPLW--TTRAKRWLRRRTGAEHPAVAWATAAIDALTSSGIRTSDGVEH--PVDAIIYGTGFAIADQVGDQTLVGAGGVTI-----RQAWDDGMEPYLGVAVHGFPNYFFITGPDTAAQARCVVECMKLMERTASR----------------------------RIEVRRSSQQVFNERAQLKPAQP-------HRQTGGLEAFDLSSA-----------ATEDDQTYDGAATLTLAGARFRVRVRLTGHLDPIDGNYHWQGTVFDSLPET-----SLTHARAATLTIGGRSAPARITEQTPWGTHSVAGVGPPPYARSGPASATT-------------
3J9O Chain:B ((79-505))-VIDKLIDLQVNSIISNDEFRALEQEWLKVQEVCQEDYDNVEVSILDVKKEELQYDFERNLYDISSSDFFKKVYVSEFDQYGGEPYGAILGLYNFENTTNDIIWLTGMGMVAKNSHAPFIASIDK-SFFGVKDLSEITHIKSFEALLEHPRYKEWNDFRNLDVAAYIGLTVGDFMLRQPYNPENNPVQYKLMEGFNEFVDYDKNESYLWGPASIHLVKNMMRSYDKTRWFQYIRGVESGGYVKNLVACVYDNKGILETKSPLNVLFADYMELSLANIGLIPFVSEKGTSNACFFSVNSAKKVEEFVDGFDSANSRLIANLSYTMCISRISHYIKCVIRDKIGSIVDVESIQKILSDWISEFVTTVYQPTPLEMARYPFRNVSIEVKTIPGKPGWYSCKINVIPHIQFEGMNTTMTIDTRLEPELFGTNN


General information:
TITO was launched using:
RESULT:

Template: 3J9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40852 for 2175 contacts (-18.8/contact) +
2D Compatibility (PS) -35777 + (NN) -1698 + (LL) 384
1D Compatibility (HY) -9600 + (ID) 2650
Total energy: -90193.0 ( -41.47 by residue)
QMean score : 0.040

(partial model without unconserved sides chains):
PDB file : Tito_3J9O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J9O-query.scw
PDB file : Tito_Scwrl_3J9O.pdb: