Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVTGAAGIGLATLAADGSVLDTWFPAPE---------------------LTESGTSATSRLAVSDVPVELAALIGRDDDRRTETIAVRTVIGSLDDVAADPYDAYLRLHLLSHRLVAPHGLNAGGLFGVLTNVVWTNHGPCAIDGFEAVRARLRRRGP-VTVYGVDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTRVTMPD----SNSVKARELSGSSNLLFRRNSVSGAVEVLARDGQGIALNEDLHAN |
3R5D Chain:A ((6-332)) | --QSLFSLAFGVGTQNRQEAWLEVFYALPLLKPSSEIVAAVAPILGYAAGNQALTFTSQQAYQLADALKGIDAAQSALLSRLAESQKPLVATLLAEDAAPSSTAEAYLKLHLLSHRLVKPHAVNLSGIFPLLPNVAWTNIGAVDLAELAELQLEARLKGKLLEVFSVDKFPKMTDYVVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGNIV------ISVGEGCLIGANAGIGIPLGDRNIVEAGLYITAGTKVALLDENALVKVVKARDLAGQPDLLFRRNSQNGAVECKT--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174974 for 2416 contacts (-72.4/contact) +
2D Compatibility (PS) -32270 + (NN) -16943 + (LL) 508
1D Compatibility (HY) -22000 + (ID) 6850
Total energy: -252529.0 ( -104.52 by residue)
QMean score : 0.440
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