Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRL-------------AADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
4BO6 Chain:C ((31-268))
------------------LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGA--GLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD---------EWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIG---GAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM--
General information:
TITO was launched using:
RESULT:
Template:
4BO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111137 for 1676 contacts (-66.3/contact) +
2D Compatibility (PS) -23114 + (NN) -8732 + (LL) 2616
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -162217.0 ( -96.79 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4BO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO6-query.scw
PDB file :
Tito_Scwrl_4BO6.pdb
: