Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-D---GVLRPTHCGATLIAGLD---MDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFR-GGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAG--ESLGFT-SGGVRLTRTKTRP-Y----LG--DLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 1AGX Chain:A ((1-331)) | -----------KNNVVIVATGGTIAGAGASSTNSATYSAAKVPVDALIKAVPQVNDLANITGIQALQVASESITDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVVHTDKPIVLVGSMRPSTALSADGPLNLYSAVALASSNEAKNKGVMVLMNDSIFAARDVTKGINIHTHAFVSQWGALGTLVEGKPYWFRSSVKKHTNNSEFNIEKIQGDALPGVQIVYGSDNMMPDAYQAFAKAGVKAIIHAGTGNGSMANYLVPEVRKLHDEQGLQIVR--SSRVAQGFVLRNAE--QPDDKYGWIAAHDLNPQKARLLMALALTKTNDAKEIQNMFWNY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231733 for 2766 contacts (-83.8/contact) +
2D Compatibility (PS) -34005 + (NN) -19739 + (LL) 196
1D Compatibility (HY) -15600 + (ID) 4000
Total energy: -304881.0 ( -110.22 by residue)
QMean score : 0.483
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