Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDI-RVRNYEADLSAC-------RIPLGDVLGPAGVAH-VTAEVTAIDADGRRVTTS-----TGASYSYDRLVLASGSHVVKPALPGLA-EFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGG-V--TLSSGERLAAATVVWCAGMRAS-RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD--EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 3CGB Chain:A ((37-353)) | -MNYVIIGGDAAGMSAAMQIVRND-------ENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET-------NKVEDVTIIGGGAIGLEMAETFVELG-----------KKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQT-NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDK----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CGB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -219453 for 2447 contacts (-89.7/contact) +
2D Compatibility (PS) -31930 + (NN) -7645 + (LL) 6768
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -268760.0 ( -109.83 by residue)
QMean score : 0.378
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