Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPRNPGSPA----ERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
3GO6 Chain:A ((19-305)) | ------------APRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVPSAVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSPPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAANWPR-N---PGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161299 for 2667 contacts (-60.5/contact) +
2D Compatibility (PS) -33194 + (NN) -31569 + (LL) -4
1D Compatibility (HY) -32000 + (ID) 14050
Total energy: -272116.0 ( -102.03 by residue)
QMean score : 0.603
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