Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEGPKKAGVLGSPIAHSRSPQLHLAAYRALGLHDWTYERIECGAAELPVVVGGFG-PEWVGVSVTMPGKFAALRFADERTARADLVGSANTLVRTPHGWRADNTDIDGVAGALGA-----AAGHALVLGSGGTAPAAVVGLAELGVTDITVVARNSDKAARLV-DLGTRVGVA-TRFCAFDSGGLADAVAAAEVLVSTIPAEVAAGYA-------GTLAAIPVLLDAIYDPWPTPLAAAVGSAGGRVISGLQMLLHQAFAQVEQFTGLPAPREAMTCALAALD |
| 1NVT Chain:A ((8-282)) | -NAKTKVIGLIGHPVEHSFSPIMHNAAFKDKGL-NYVYVAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG--LDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAII--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180153 for 2155 contacts (-83.6/contact) +
2D Compatibility (PS) -27072 + (NN) -5393 + (LL) 396
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -233322.0 ( -108.27 by residue)
QMean score : 0.381
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