Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAP-----RCQKVLEGTGFVISPD-RVMTNAHVVAGSNNVTVYAG-DKPFEATVVSYDPSVDVAILAVPHL-PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS
3TJO Chain:A ((33-229))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQ----------------DYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESH------------


General information:
TITO was launched using:
RESULT:

Template: 3TJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116729 for 1493 contacts (-78.2/contact) +
2D Compatibility (PS) -19368 + (NN) -5388 + (LL) 16704
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -138081.0 ( -92.49 by residue)
QMean score : 0.402

(partial model without unconserved sides chains):
PDB file : Tito_3TJO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TJO-query.scw
PDB file : Tito_Scwrl_3TJO.pdb: