Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAP-----RCQKVLEGTGFVISPD-RVMTNAHVVAGSNNVTVYAG-DKPFEATVVSYDPSVDVAILAVPHL-PPPPLVFAAE-PAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
3TJO Chain:A ((33-229)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IADVVEKIAPAVVHIELFRKLPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQGKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQ----------------DYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESH------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116729 for 1493 contacts (-78.2/contact) +
2D Compatibility (PS) -19368 + (NN) -5388 + (LL) 16704
1D Compatibility (HY) -10800 + (ID) 2500
Total energy: -138081.0 ( -92.49 by residue)
QMean score : 0.402
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