Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR
4I02 Chain:B ((24-221))
------------LEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFE-EG--QERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDATGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISA---TIVVYGT-
General information:
TITO was launched using:
RESULT:
Template:
4I02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142829 for 1420 contacts (-100.6/contact) +
2D Compatibility (PS) -21393 + (NN) -7040 + (LL) 1300
1D Compatibility (HY) -23600 + (ID) 6550
Total energy: -200112.0 ( -140.92 by residue)
QMean score : 0.618
(partial model without unconserved sides chains):
PDB file :
Tito_4I02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I02-query.scw
PDB file :
Tito_Scwrl_4I02.pdb
: