Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4FQ9 Chain:B ((3-172))
-TKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
General information:
TITO was launched using:
RESULT:
Template:
4FQ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125122 for 1332 contacts (-93.9/contact) +
2D Compatibility (PS) -17992 + (NN) -8774 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8500
Total energy: -185380.0 ( -139.17 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4FQ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FQ9-query.scw
PDB file :
Tito_Scwrl_4FQ9.pdb
: