Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPFRNIGIIGRLGSTQVLDTIRRLKKFLIDRHLHVILEDTIAEVLPGHGLQTCSRKIMGEICDLVVVVGGDGSMLGAARALARHKVPVLGINRGSLGFLTDIRPDELEAKVGEVLDGQYIVESRFLLDAQVRRGIDSMGQGDALNDVVLHPGKSTRMIEFELYIDGQFVCSQKADGLIVATPTGSTAYALSAGGPIMHPKLDAIVIVPMYPHMLSSRPIVVDGNSELKIVVSPNMQIYPQVSCDGQNHFTCAPGDTVTISKKPQKLRLIHPIDHNYYEICRTKLGWGSRLGGGD |
1Z0S Chain:A ((30-275)) | ----MRAAVVYKTDG-----HVKRIEEALKRLEVEVELFNQP--------------SEELENFDFIVSVGGDGTILRILQKLK-RCPPIFGINTGRVGLLTHASPENFEVELKKAVE-KFEVERFPRVSCSAM------PDVLALNEIAVLSRKPAKMIDVALRVDGVEVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFGWKPYVVSMERKIEVIA-----EKAIVVADGQKSVD--FDGEITIEKSEFPAVFFKNE--KRFRNLFGKVR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186659 for 2078 contacts (-89.8/contact) +
2D Compatibility (PS) -26793 + (NN) -7324 + (LL) 1472
1D Compatibility (HY) -14000 + (ID) 3350
Total energy: -236654.0 ( -113.89 by residue)
QMean score : 0.476
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