Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFALIGAAGYIAP-RHMRAIKDT-GNCLVSAYDINDSV-GIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGVHFYDMLHFIFGK-LQRNVVHF---TSEYKAAGYLEYEQARV-RWFLSVDANDLP----ESVKGKKPT-YR---SITV---------NGE-----------E---MEFSEGFTDLHTTSYEEILAGRGY--GIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
| 3M2T Chain:A ((5-337)) | LIKVGLVGIG-AQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLN---------QVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANK--PRAPLWGLDST-LRSFLLAQAIHTIDLAITFGDGELRRVQSSVQRHDDALIVRADMAFSSGATASLLAGTSFPYFEFDMKLVSSSSTLVELDNLWNITLHEPEHATRPTGAAKRWRGAWQPGPLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRVIEEICSADAVAQGLQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172805 for 2389 contacts (-72.3/contact) +
2D Compatibility (PS) -31239 + (NN) -5038 + (LL) 824
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -217508.0 ( -91.05 by residue)
QMean score : 0.409
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