Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
2OSB Chain:A ((1-188))
MNLVLMGLPGAGKGTLGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OSB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58592 for 1370 contacts (-42.8/contact) +
2D Compatibility (PS) -20011 + (NN) -9435 + (LL) 2132
1D Compatibility (HY) -16000 + (ID) 4750
Total energy: -106656.0 ( -77.85 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2OSB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OSB-query.scw
PDB file :
Tito_Scwrl_2OSB.pdb
: