Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTP--ITVFGDGEQTRDFIYVADLVDFLVQA------LEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPV---THADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
| 3KO8 Chain:A ((3-285)) | -----IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---NPSAELHVRDLKD-YSWGAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYG-DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLR-----HGVIYDFIMK-LRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAE---VLGLRPEIRLV-------GDVKYMTLAVTKLMK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123872 for 2217 contacts (-55.9/contact) +
2D Compatibility (PS) -27133 + (NN) -3896 + (LL) 2008
1D Compatibility (HY) -20800 + (ID) 4900
Total energy: -178593.0 ( -80.56 by residue)
QMean score : 0.542
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