Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASEEKFTRQTLLDVQPLTPNLFTLRTSRDAGFRFRAGQFARLGVYKPSGSIVWRAYSMVSAPHDEFLDFFSIVVPDGEFTSELSRLREGDQLLVD-RQAFGFLTLDRFVDGRDLWLLATGTGVAPFVSILQDFEVWERFESIKLVYSVRESKELAYRELIAGLAEREYLAEHA-------HKLQFIPVVTREQVPGCLNGRITTLIENGDLERAADL-ELTPEHSRVMLCGNPQMIEDTRAVLKARGMNLSLTRRPGQVAVENYW
2QDX Chain:A ((2-242))
------NLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEV-DGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKPTGTLVHDDLL-PGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPE-----HEYFGDQVKEKLIYYPLVTREP--FRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSFGLKISPRM-----------
General information:
TITO was launched using:
RESULT:
Template:
2QDX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162519 for 1850 contacts (-87.8/contact) +
2D Compatibility (PS) -24599 + (NN) -1569 + (LL) 2016
1D Compatibility (HY) -22000 + (ID) 4750
Total energy: -213421.0 ( -115.36 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_2QDX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QDX-query.scw
PDB file :
Tito_Scwrl_2QDX.pdb
: