Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRPLVAGNWKMHGTHSSVAELIKGLRQLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVS--RKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAE-NAEVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAAGS
4FF7 Chain:B ((3-236))
-RTFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKA-SGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI--LSIGETLEEKKAGKTLDVVERQLNAVLEE--VKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASL--------------
General information:
TITO was launched using:
RESULT:
Template:
4FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141904 for 1877 contacts (-75.6/contact) +
2D Compatibility (PS) -25359 + (NN) -10127 + (LL) 1116
1D Compatibility (HY) -21200 + (ID) 5100
Total energy: -202574.0 ( -107.92 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_4FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FF7-query.scw
PDB file :
Tito_Scwrl_4FF7.pdb
: