Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLHVDLGERSYPIYIGENLLG--DARW-FAPHIVGRRVAVISNETVAPLYLETLLKALQ--GHE------VTPVVLPDGEAYKQWETLQLIFDVLLKER--HDRKTTLIALGGGVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDALLA--------------LEPTVVTEAIERSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEMSHRLGWLSAAERDRGIRLLRRAGLPVVPPA-EM---------TAEDFMEHMAVDKKVLDGRLRLVLLQGLGNAVVT--GDFPREILDATLRTDYRALADQLGDE |
| 1SG6 Chain:A ((10-392)) | ---------LGRESIIADFGLWRNYVAKDLISDC-SSTTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSA-----GLRNLLNWGHSIGHAIEAILTP-QILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKK-------IVLLSAIGTPYETRASVVANEDIRVVLA------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211684 for 2852 contacts (-74.2/contact) +
2D Compatibility (PS) -36493 + (NN) -17998 + (LL) 2140
1D Compatibility (HY) -24400 + (ID) 6300
Total energy: -294735.0 ( -103.34 by residue)
QMean score : 0.508
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