Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | HAAFTVAHEIGHLLGLSHDDSKFCEENFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQIPGPEELPGQTYDASQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSTSSHGNWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPKNNGRYCTGK |
| 1R55 Chain:A ((136-207)) | -AAATMAHEIGHSLGLSHDPDGCCVEA-AAESGGCVMAAATG-HPFPRVFSACSRRQLRAFFRKGGGACLSNAPS------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R55.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8898 for 443 contacts (-20.1/contact) +
2D Compatibility (PS) -7581 + (NN) -3493 + (LL) 4476
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -19996.0 ( -45.14 by residue)
QMean score : 0.106
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