Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKLLALLIMFYSGISVASAPTSWQFGFPAPATEIMEVIVKSHLFVMSVMVTIMLFVWALLAYVMFRFRKSKVTNISKTHHSILLEIVWFVIPTII-VGILAFENAKLLKLQEKIPKADITLKVIGHQWYWSYRYPEYQGVSFDSYI-----KEKDDFVKGDLK-------------LFSVDNNVVLPVNTNVRLQVTAGDVIHSWGVPAFGIKIDAIPGRLNEAWFNVKKPGVYYGQCYELCGQGHGFMPIVIEAVSKEDFNKWIENKKLVS
3FYI Chain:D ((17-256))--------------------------GFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFTHNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQE-IPEADVTVKVTGYQWYWGYEYPDEE-ISFESYMIGSPATGGDNRMSPEVEQQLIEAGYSRDEFLLATDTAMVVPVNKTVVVQVTGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVVSEEAYAAWLEQHHHH-


General information:
TITO was launched using:
RESULT:

Template: 3FYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146177 for 1480 contacts (-98.8/contact) +
2D Compatibility (PS) -24183 + (NN) -15307 + (LL) 2624
1D Compatibility (HY) -21600 + (ID) 4650
Total energy: -209293.0 ( -141.41 by residue)
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_3FYI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FYI-query.scw
PDB file : Tito_Scwrl_3FYI.pdb: