Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHRDYH---VMITRGNKVMNLANTHLFNDDHYFIFPKN-RRDDVTKLPFIEFQADPIYINQIKQWYNDNLEQ-------DYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
1I6A Chain:A ((87-298))
------------------------ETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLLPALAVPP-ERKRDGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFD
General information:
TITO was launched using:
RESULT:
Template:
1I6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94643 for 1472 contacts (-64.3/contact) +
2D Compatibility (PS) -21224 + (NN) -6658 + (LL) 3036
1D Compatibility (HY) -10000 + (ID) 1450
Total energy: -130939.0 ( -88.95 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_1I6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6A-query.scw
PDB file :
Tito_Scwrl_1I6A.pdb
: