Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITGERIYLRPFQIIDANQKLAFHLANKAFFEGYSMERDDRFYTIEEQQSLISRLEDFAASDVEYYYGIFLNDTDELIGTINLFSILRESLQSAFIGYFLDKKHNGNGYATEAVQLIVDFGFDILGLHRIEAGVMPKNERSKQVLLKAGFHLEGLAVQNVRINGTWEDHQVLAIINPGD
3TTH Chain:A ((5-168))
-----KKIRLSALEREDLKFVHELNNN---IMS-YWFEEP--YESYRELEDLHIKHI---HDQSERRFIIKDL-KDNKVGLVELTEID-FIHRRCEFAIIISPGEEGKGYATEATDLTVEYAFSILNLHKIYLLVDEDNPAALHIYRKSGFAEEGKLVDEYYSKGRYRTAIRMYVLKK--
General information:
TITO was launched using:
RESULT:
Template:
3TTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84771 for 1128 contacts (-75.2/contact) +
2D Compatibility (PS) -17327 + (NN) -4256 + (LL) 348
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -113456.0 ( -100.58 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3TTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TTH-query.scw
PDB file :
Tito_Scwrl_3TTH.pdb
: