Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNLEKELKEYLGFDEFRPGQKEVIETALAKQNCFAMLPTGTGKTICYQLAGHLMDGLVLIVSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQILAS----IHSYKFIFLSPEMLNNET-V----KNLLLKQKISLFVIDEAHCISQWGHDFRPDYLMLGRFIQEAKFPVTMVLTATATKKVRADILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQ-HVKKDRLYELVRK--LQTPGIIYFSSKKLAESTAHELSEIAELRVAYYHGDMDTEDRIIIQQQFVYGQLDVICATSAFGMGIDKADIRYVIHYHMPADLEAYLQEIGRAGRDGEDSVAILLYANGDEFIQMQLADQDIPDANLMNLTTEQRKTLPETEQRFIDYYQRSGLSTKELTDKMDYRKKWKRANLQQFIGYLHT-TDCRRNYILRYFEEAPLEVTPENCCDLDGAEIINFEKRAKIKQKEIPTWEAYLAYLLQ |
| 2V1X Chain:A ((31-437)) | -KVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGIS-ATMLNASSSKEHVKWVHAEMVNKNSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNL-GIHAGAYHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVVME----------------------------------------------NVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW---ACNKMCDNCCKDSAF------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -278585 for 3133 contacts (-88.9/contact) +
2D Compatibility (PS) -43146 + (NN) -22528 + (LL) 6596
1D Compatibility (HY) -25200 + (ID) 6250
Total energy: -369113.0 ( -117.81 by residue)
QMean score : 0.587
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