Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSEFGDKNEKLLHKVENLN--PDVIAITGDLFDRQGDSVPKELIKKLTKIA-----PVYFSPGNHEYDVKNAYEDDYKPFLEKMGVVNLEDKTATIDVGGQKFQMSGLRSSANLDYDYSYYKKGLAEIQTQ--QDSQYYQVLLSHMPDYFKLYVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK |
| 2HY1 Chain:A ((12-267)) | ---------------------------------------PRPDYVLLHISDTHLIDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH---------DDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHP-PIPSVLDMAVTVELRD-QAALGRVLRGTDVRAILAGHLHY-------STNATFVGIPVSVASATCGCNLVHVYPDT------VVHSVIP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48956 for 1838 contacts (-26.6/contact) +
2D Compatibility (PS) -23198 + (NN) -6214 + (LL) 6060
1D Compatibility (HY) -3200 + (ID) 1900
Total energy: -77408.0 ( -42.12 by residue)
QMean score : 0.326
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