Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISNQELT--LTPLRGKSGKAYIGTYPNGERVFVKYNTTPILPALAKEQIAPQLLWA-RRTSNGDMMSAQEWLDGRTLTKEDMGSKQIIHI-LLRL-HKSRPLVNQLLQLGYKI--------------ENPYDLLMDWEKQTPIQIRENTYLQSIVTELKRSLPEFRTEVAT-----IVHGDIKHSNWVITTSGLIYLVDWDSVRLTDRMYDVAYILSHYIP-------QKHWKDWLSYYGYKD--NEKVWSKIIWYGQFSYLSQIIKCFDKRDMEHVNQEIY--ELRKFRELIKKHNAS--------- |
| 2PPQ Chain:A ((5-320)) | TDITEDELRNFLTQYDVGSLTSYKGIAENSNFLLHTTKDPLILTLYEKKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYDVSICLNAWCFEKDGAYNVTKGKALLEGYQSVRPLSEAELEALPLLSRGSALRFFLTRLYDWLTTPAGALVVKKDPLEYLRKLRFHRTIANVAEYGLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102206 for 1942 contacts (-52.6/contact) +
2D Compatibility (PS) -27265 + (NN) -2195 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -141566.0 ( -72.90 by residue)
QMean score : 0.240
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