Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIWDAYDQYGFITGLTLNRDQNIPQGLFHLVVDVILFHEDGDVLMMKRHPKKKAFPAYFEA-TAGGSALKGENAKQAILRELKEETGIVPQCLTFL--NREWFS--ERSYFVDHFIAKYNGAKDIITLQEGETVDYIWLKPEYIDLFLSKNKLIPSQIKLLKSLI
1Q27 Chain:A ((6-155))
DERLDLVNERDEVVGQI-LRTDPALRWERVRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSV-GGAVQSGETYEEAFRREAREELNVEIDALSWRPLASFSPFQTTLSSFMCVYELR--SD-ATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRC
General information:
TITO was launched using:
RESULT:
Template:
1Q27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43366 for 974 contacts (-44.5/contact) +
2D Compatibility (PS) -15593 + (NN) -7547 + (LL) 396
1D Compatibility (HY) 3600 + (ID) 1450
Total energy: -63960.0 ( -65.67 by residue)
QMean score : 0.174
(partial model without unconserved sides chains):
PDB file :
Tito_1Q27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q27-query.scw
PDB file :
Tito_Scwrl_1Q27.pdb
: