Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLEINHLEKVFRTRFSKEETRALQDVDFKVEQGEFIAIMGESGSGKTTLLNILATLEKPTNGQ-------VILNGEDITKIKEAKLASFRLKNLGFVFQDFNLLDTLSVRDNIYLPLVLDRKRYKEMDHRLSELSSHLRIDDLLDKRPFELSGGQKQRVAIARSLITNPQILLADEPTAALDYRNSEDLLNLFETINLD-GQTILMVTH-SANAASHAKRVLFIKDGRIFHQLYRGNKNNSEFNKDISLTMSAILGGE |
| 1OXU Chain:B ((6-242)) | ----VKNVSKVFK----KGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKI--------GMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGK----LVQVGKPEDLYDNPVSIQVASLIGEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OXU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96279 for 1814 contacts (-53.1/contact) +
2D Compatibility (PS) -24029 + (NN) -5002 + (LL) 2104
1D Compatibility (HY) -19200 + (ID) 4050
Total energy: -146456.0 ( -80.74 by residue)
QMean score : 0.524
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