Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVPAAPLLSVEGLEVTFGTDAPAVCGVDLAVRSGQTVAVVGESGSGKSTTAAAILGLLPAGGRITAGRVVFDGRDITGADAKRLRSIRGREIGYVPQDPMTNLNPVWKVGFQVTEALRANTDGRAARRRAVELLAEAGLPDPAKQAGRYPHQLSGGMCQRALIAIGLAGRPRLLIADEPTSALDVTVQRQVLDHLQGLTDELGTALLLITHDLALAAQRAEAVVVVRRGVVVESGAAQSILQSPQHEYTRRLVAAAPSLTARSRRPPESRSRATTQAGDILVVSELTKIYRESRGAPWRRVESRAVDGVSFRLPRASTLAIVGESGSGKSTLARMVLGLLQPTSGTVVFDGTYDVGALARDQVLAFRRRVQPVFQNP-YSSLDPMYSVFRAIEEPLRVHHVGDRRQRQRAVRELVDQVALP-------SSILGRRPRELSGGQRQRVAIARALALRPEVLVCDEAVSALD----VLVQAQILDLLADLQADLGLTYLFISHDLAVIRQIADDVLVMRAGRVVEHASTEEVFSRPRHEYTRQLLQAIPGAPSAPRKVGNL |
| 4AYT Chain:A ((363-567)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDG-HDIRQL---NPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSV--TAEEIQR---VAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQ-EALDRLMD-----GRTVLVIAHRLSTIKN-ANMVAVLDQGKITEYGKHEE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113890 for 1446 contacts (-78.8/contact) +
2D Compatibility (PS) -20653 + (NN) -5384 + (LL) 24136
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -132991.0 ( -91.97 by residue)
QMean score : 0.404
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