Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
4AZQ Chain:A ((8-137))
-KDLEGKWRLMESHGFEEYMKELGVGLALRKMAA--MAKPDCIITCDGNNITVKTESTVKTTVFSCNLGEKFEETTADGRKTETVCTFQDGALVQHQ----QWDGKESTITRKLKDGKMIVECVMNNATCTRVYEKV
General information:
TITO was launched using:
RESULT:
Template:
4AZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28161 for 945 contacts (-29.8/contact) +
2D Compatibility (PS) -14620 + (NN) -7893 + (LL) 1048
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -59876.0 ( -63.36 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_4AZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZQ-query.scw
PDB file :
Tito_Scwrl_4AZQ.pdb
: