Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQASMRSPNMEPFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRPDEDLRNCESDTEEDIARRKALHPRRRSSTS
3SOA Chain:A ((7-301))----------------TRFTEEYQLFEELGKG--SVVRRCVKVLAGQEYAAMIINTKKLSA----RDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK-LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQ--ETVDCLKKFNARRKLKG-----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3SOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124997 for 2315 contacts (-54.0/contact) +
2D Compatibility (PS) -30806 + (NN) -9189 + (LL) 4776
1D Compatibility (HY) -21600 + (ID) 5300
Total energy: -187116.0 ( -80.83 by residue)
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_3SOA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SOA-query.scw
PDB file : Tito_Scwrl_3SOA.pdb: