Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSR-----DR--NKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGI-IPPNATLIFDVELLKLE
3KZ7 Chain:A ((5-119))
-KYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID
General information:
TITO was launched using:
RESULT:
Template:
3KZ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50733 for 768 contacts (-66.1/contact) +
2D Compatibility (PS) -11905 + (NN) -4770 + (LL) 208
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -78300.0 ( -101.95 by residue)
QMean score : 0.766
(partial model without unconserved sides chains):
PDB file :
Tito_3KZ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZ7-query.scw
PDB file :
Tito_Scwrl_3KZ7.pdb
: