Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEKVKEFLSTL |
| 1J90 Chain:A ((18-212)) | ------------------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKW---------------RNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTN-------KKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESI--HVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWL------IHQRRPQSCKVLVLDADLNLE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72830 for 1500 contacts (-48.6/contact) +
2D Compatibility (PS) -20607 + (NN) -6591 + (LL) 3932
1D Compatibility (HY) -15600 + (ID) 3300
Total energy: -114996.0 ( -76.66 by residue)
QMean score : 0.462
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