Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL |
| 1J90 Chain:A ((18-212)) | ------------------TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKW---------------RNVNGVNLLELMYKDPKKWAMPFQSYVTLTMLQSHTAPTN-------KKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESI--HVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWL------IHQRRPQSCKVLVLDADLNLE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63283 for 1500 contacts (-42.2/contact) +
2D Compatibility (PS) -20704 + (NN) -7544 + (LL) 3704
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -106827.0 ( -71.22 by residue)
QMean score : 0.459
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