Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MGGHPQLRLVKALLL-LGLNPVSASLQDQHCESLSLASNISGLQCNASVDLI----------GTCWPRSPAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVNYSECQEILNEEKKSKVHYHVAVIINYLGHCISLVALLVAFVLFLRLRPGCTHWGDQADGALEVGAPWSGAPFQVRRSIRCLRNIIHWNLISAFILRNATWFVVQLTMS-PEVHQSNV-GWCRLVTAAYNYFHV----TNFFWMFGEGCYL---HTAIVLT-YSTDRLRKWMFICIG----W----GVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGP---MIL-VLLINFIFLFNIVRILMTKLRASTT-SETIQYRKAVKATLVLLPLLGITYMLFFVNPGE-DEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHRWQDKHSIRARVARAMSIPTSPTRVSFHSIKQSTAV-- |
| 4C8H Chain:A ((25-476)) | FRYMPFSPAGTPFGFTDRRYLTMNEVGYVSTVKNSEQYSITVSFFDVGRFREYHFEDLFGYDLCFLNEKGTLFGQSKTGQIQYRPHDSI---------------------------HSNWTKIIPLQAGERITSVAATPVR--------VIVGTSLGYFRSFNQFGVPFAVEKTSPIVALTAQNYRVFSVHYS--------QFHGLSYSLSELKRYYKRECPLPMSLPNINSDMK--KDANLDYYNFNPMGIKSLFFSSYGDPCIFGSDNTLLLLSKWRSPEESKWLPILDSNMEIWKMSGGKETTDIHVWPL-ALAYDTLNCILVKGKHIWPEFPLPLPSEMEIRMPVFVKSKLLEENKAILNKEIQIPVSMAAEEEYLRSKVLSELLTDTLEND--------GEMYGNENEVLAALNG---AYDKALLRLFASACSDQNVEKALSLAHELKQDRALTAAVKISERAELPSLVKKINNIREARYEQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211998 for 2814 contacts (-75.3/contact) +
2D Compatibility (PS) -39392 + (NN) 4530 + (LL) 3852
1D Compatibility (HY) -6000 + (ID) 3000
Total energy: -252008.0 ( -89.56 by residue)
QMean score : 0.147
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