Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRWVWALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACE--KTSFTFLRQELPVRLANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIRNRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGSTNPAHPKHIGSIDPNCNVSEVVKDAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVESHESS-LILPPIKVMVALGEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVIYLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRVS |
| 4E01 Chain:A ((70-405)) | ------------------------------LTPTMMLYSGRSQDGSHLLKSGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPI--KDQADEAQYCQLVRQLLDDHKDVVTLLAEGLRESRKHIE----DEKLVRYFLDKTLTSRLGIRMLATHHLALHE-----DKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRING------HVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA-------------GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDG------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192992 for 2383 contacts (-81.0/contact) +
2D Compatibility (PS) -31503 + (NN) -7561 + (LL) 3440
1D Compatibility (HY) -20400 + (ID) 5050
Total energy: -254066.0 ( -106.62 by residue)
QMean score : 0.531
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