Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLLTGELTSSVRQYLPHSLVLKDHGINKLAEKMKNELNEELEHANKLAERILLLKGVLNFQDTNEISKYDRKFIKDTIRKILEDNLKLEREGIKDYKEAISVAEKERDFVSAILLEEPLKNEEEHFPLD
3IS8 Chain:S ((11-131))
LNKILGNELIA-INQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKL------LIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYL
General information:
TITO was launched using:
RESULT:
Template:
3IS8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10807 for 873 contacts (-12.4/contact) +
2D Compatibility (PS) -13302 + (NN) -9365 + (LL) 188
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -46086.0 ( -52.79 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_3IS8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IS8-query.scw
PDB file :
Tito_Scwrl_3IS8.pdb
: