Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKIIISFSIALLLIFCFFIFFKGESPLEINISYINFYVKSKISKTFANSDVDIGSTSVILQKDGKDPYLVITNLKIVNSGFIIEAPNLFVHFKLSSLFRANVKISQVLADSVCAYVDQEKAGFKVVDFDLKNSLKAVREFFFDLNTGSRIEITNIAINKSTEGELFIDELYIGKREDFNVLDIRVHTKDEKGFLDDLSITIKNRNGLLNVYGIFYNLKLKLFSEFSTLIKNYNLGKNIGFKGNFSMRISGKNEIIDGNVYILNTENRVNKNLAITNVNINLTYSDGVIGVKNFHFNLNGTYLSLMG------KMNFSANHALF---RVNISKFAAKDLCTYVPDYIINSEFKSWYCDNIDGNILNVIVSFN----------GKINNLINNDLSDVIVVADIENGSVKFDEDFEQVRELSGDLVL----KNDSLKITVNSAKFQNFTINGCNIEMNSLDREDSVLTINGQAVSDAYG------LYEPIKFKLDDVIKVE---KNKIGGAAKSVFNF---RVFNINADDKEVN-FSAKFHSEIDNLVIYDANL--GRYDIKLDFGSDFIDLN-----GSGIVNNTQLLFDLKSSNKNESFTWSLTGDLPA------QILNFNGGYFNANIESVINQDKTGYVNGNVDLSEFELRSSYLGWKNRFEDHNKILFSVKLKGANRLLIDRLDVIGSDLDIKFSGRVENGDLYLNTSSFKLPNNDLSIEIKSSKGKNIINVCGEKINLSDVLDLLGKNDSGLSNNVEVSMNVDNVIMKEGIVIKDASLNISCTKGNCNGSQFTGQFLEDNSNILAEYSEIGLEIHADNSGMLLRSLGISKSVKNGKLSFYLSPQRE----SGEHYGMLSIGNFYI----------KDAPLLTTLLSMSSLPGIVNT--IKNEGVYFYKYNA--PFSHKDGTVEIEESWLEGAELGISTSGKLDIRGYKFQVEGQVIPAYSINKSLLKIPIVGKLLTGGKSRGIISIDYKASGDDKNSNIFVNFISSLTPSLLKRLLGVFDRAMTKANEAITNSLKGGMKKKFSSV |
| 4NFU Chain:A ((15-633)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AFEALTGINGDLITRSWSASKQAYLTERYHKEEAGAVVIFAFQPSFS-EKDFFDPDNKSSFGEIKLNRVQFPCMRKIGKGDVATVNEAFLKNLEAVI------DPRTSFQASVEMAVRSRKQIVFTGHSSGGATAILATVWYLEKYFIRNPNVYLEPRCVTFGAPLVGDSIFSHALGREKWSRFFVNFVTRFDIVPRITLARKASVEETLPHVLAQLDPRNSSVQESEQRITEFYTSVMRDTSTVANQAVCELTGSAEAILETLSSFLELSPYRPAGTFVFSTEKRLVAV---NNSDAILQMLFYTCQASDEQEWSLIPFRSIRDHHSYEELVQSMGMKLFNHLDGENSIESSLNDLGVSTRGRQYVQAALEEEKKRVENQK-KIIQVIQQERFLKKLAWIEDE----YKPKCQAHKNGYYDSFKVSNEENDFKANVKRAELAGVFDEVLGLLKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRH-LKNEDTGPYMKRGRPTRYIYAQRGYEHHILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKGKPYEEVEVRVKTLEGMLREWITAGEVDEKEIFLEGSTFRKWWITLPKNHKSHS-PLRDYMMDEI----------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14438 for 4332 contacts (3.3/contact) +
2D Compatibility (PS) -56711 + (NN) -1980 + (LL) 28212
1D Compatibility (HY) -11600 + (ID) 4450
Total energy: -32091.0 ( -7.41 by residue)
QMean score : 0.052
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