Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNLESLPKHLAIIMDGNSRWANSQGRVKIDGYRKGSEVAYDIAKHCIALAIPYLTLYAFSMENWLRPKEETDCLFDLFYSILTDRDKVNFFHNYNIKLNFVGNLSLLPGKILNQIKESEEMTRKNDGLLLTVAVSYGAKQEIIHAVRNITRKNIDCVSEDEFEKFLYTKDLP-KLDLLIRTGGEKRLSNFLLWQAAYAELYFCDTLWPDFSCQDLSKALEDYTKREKRYGR
3UGS Chain:A ((8-224))
--------KHLAVVMDGNR----------------GVKTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFIFELLDRCLD--EALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRVIEKKLELNEENLTQNL----DLPLDVDLMLRVGNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFG-
General information:
TITO was launched using:
RESULT:
Template:
3UGS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120405 for 1457 contacts (-82.6/contact) +
2D Compatibility (PS) -21769 + (NN) -7276 + (LL) 1908
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -169142.0 ( -116.09 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_3UGS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UGS-query.scw
PDB file :
Tito_Scwrl_3UGS.pdb
: