Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEKSQACHDSLLDSVGQTPMVQLHQLFP-----KHEVFAKLEYMNPGGSMKDRPAKYIIEHGIKHGLI-TENTHLIESTSGNLGIALAMIAKIKGLKLTCVVDPKISPTNLKIIKSYGANVEMVEEPDAHGGYLMTRIAKVQELLATIDDAYWINQYANELNWQSHYHGAGTEIVETIKQPIDYFVAPVSTTGSIMGMSRKIKEGHPNAQIVAVDAKGS-VIFGDKPINRELPGIGASRVPEILNRSEINQVIHVDDYQSALGCRKLIDYEGIFAGGSTGSIIAAIEQLITSIE-EGATIVTILPDRGDRYLDLVYSDTWLEKMKSRQGVKSE |
4LMB Chain:A ((18-310)) | ---------------VGRTPLVQLNRI-PVAEGVKARIVVKLESMNPAASVKDRIGVSMVEDAEAAGLIHPDKTILVEPTSGNTGIALAMVAAAKGYRLVLTMPETMSLERRAMLKAYGAQLELT--PGSQG--MEGAITRAEEIVENTPNAYSLQQFRNPANPKIHRETTAEEIWADTDGLVDIVIGGVGTGGTITGIAETIKPRRPQFQAIAVEPSNSPVLSGGQPGPHKIQGIGAGFIPAIFRPELIDEVIIVDDTEAFAYARRLARQEGLLSGISAGAALWAAIQVGKRPENEDKLIVMIQPSFGERYL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143506 for 2686 contacts (-53.4/contact) +
2D Compatibility (PS) -31061 + (NN) -10500 + (LL) 2776
1D Compatibility (HY) -16000 + (ID) 5250
Total energy: -203541.0 ( -75.78 by residue)
QMean score : 0.505
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