Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAYNFKSVCVNPTHVKYAAERLADSEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGRFDDVQQDIEAVVKAAKGHTVKVIIETVLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDTVGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
1MZH Chain:A ((2-215))
IDVRKYIDNAALKPHLSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAK--KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGADRIGTSSGISIAEEFLK----
General information:
TITO was launched using:
RESULT:
Template:
1MZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112690 for 1893 contacts (-59.5/contact) +
2D Compatibility (PS) -23535 + (NN) -8000 + (LL) -192
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -167717.0 ( -88.60 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_1MZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MZH-query.scw
PDB file :
Tito_Scwrl_1MZH.pdb
: