Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSN-SAGMQVTGAAYIEPYGKLF-EYGFNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLH--SPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLL-IQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTS-RTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS |
| 3K30 Chain:A ((9-358)) | -APYDVLFEPVQI-GPFTTKNRFYQVPHCNGMGYRD---PSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLS-RETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGG-SLENRMRLLRELLEDTLDECA----GRAAVACRITVEEEID--GGITREDIEGVLRELGE-L-PDLWDFAMGSWEGDSVTSRFAPEGRQE-EFVAGLKKLT--TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIRECIGCNICVSGD--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217369 for 3115 contacts (-69.8/contact) +
2D Compatibility (PS) -36388 + (NN) -15982 + (LL) 2716
1D Compatibility (HY) -8400 + (ID) 3600
Total energy: -279023.0 ( -89.57 by residue)
QMean score : 0.466
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