Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKI-VSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELVSKIKEL
1XRG Chain:A ((34-156))
-EVVKTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYPARSCVEVSKLPKGVLIEIEAVAIK---
General information:
TITO was launched using:
RESULT:
Template:
1XRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43289 for 928 contacts (-46.6/contact) +
2D Compatibility (PS) -13397 + (NN) -7229 + (LL) 552
1D Compatibility (HY) -12000 + (ID) 3500
Total energy: -78863.0 ( -84.98 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1XRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRG-query.scw
PDB file :
Tito_Scwrl_1XRG.pdb
: